Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015852649.1_cds_XP_016511922.1_24609
CDS Infomation

[gene=LOC107829022] [db_xref=GeneID:107829022] [protein=glucan endo-1,3-beta-glucosidase-like] [protein_id=XP_016511922.1] [location=join(12720..13313,13373..13837,15516..15840,16009..16037)] [gbkey=CDS]
Sequence

ATGCCAGACAAAAGACCGTCCATGTTGTTGGTGCTAATATTCTTTGTTGCTCCTCTGTTT
TTCCCGGCTGTTAATTCTATCGGTGTTAACTATGGCACACTAGGTAACAACCTTCCCCCG
CCAGCTCAAGTTGCTCAGTTTCTCAAAGACAAGACCGTCATTGACCGCATCAAAATCTTC
GATATCAACCCAGACATCCTCCGAGCCTTCGCTAACACAGGAATCTCAGTTACCGTCACT
GTTCCAAACGGAGAGATCCCCAACCTCTTGGACATCAGCTATGCTCGCCGATATATCGAC
GCCAACATCAAGCCCTTTTACCCACAAACCAAGATTGATGTTATTCTTGTGGGAAATGAA
GTCCTCCACTGGGACGGACCAGATATCCAGATGAAGCTGGTTCCTGCCATGAAAACCTTT
TACCAAGCTCTTGGTCAGTCCGGGTTAAAGGATATCAAGGTCTCCTCTCCTCATTCTCTG
GGTATCCTTTTAAGATCCAACCCACCTAGCGCCGCGAGGTTTAGGCCTGGTTGGGATGTG
GGTATTCTGGCCCCTATGCTCCAATTCTTGCGCGAGACAAAAGGACCTTTTATGGNTAAA
GGACCTTTTATGGTCAACCCTTACCCATATTTTGGTTACAACCCAAAACAAGAGGACTTC
CTTCTATTCAGAAAAAACAAGGGTGTCTACGACAGGTTTTCTAAGAAATGGTACACAAAC
TCGTTCGACATGTTGTTAGATGCGGTGTATATGTCGATGGTAAGGCTTAAATACCCAGAT
GTAGAGATTGTAGCAGCGGAGACAGGATGGCCATCTCAGGGTGAGTCATTTGAGCCTCAA
TGTACGGTGGAAAATGCGGCTTCTTACAATGGTGGGCTGTTGAGGAAGTACAACTCTGGG
ACAGGGACGCCATTGATGCCGCACAGGAAGATTGAGACATACATATTCGGATTGTTCAAC
GAGAACACTAAACCCGGTTCAACTGCTGAGAGGAATTTTGGATTGTTCCGCCCGGATTTT
ACCCCGGTTTACAATATTGGAGTCTTGAAAGGAGAGCAGGCTCAACCAACACCAGCATTG
CCCGCGCCAAGAAATGGCAGTGGCAACAACGGGCAACCAACATCACCAGTAAGACCAGCC
GAGAGCAAAAAATTCTGCATGCCGAAAGCTGAGGCGACGGATGCACAATTACAATCCAAC
ATAAACTATGTGTGCAGCCAAGGAGTTGATTGCACCCCAATTCAAGCTGGAGGTCCCTGC
TTTAATCCCAACACTATTAGGTCTCACGCTGCCTTTGCCATGAATTCTTATTACCAAAGG
GAGGGCCGCAACCAATTCAACTGTGACTTTGCCGGTACTGGTGTCGTCGCCTCCGCTGAT
CCAAGTTATGGCACATGCAAATTCCAATCTTGA

Peptide Sequence

PEP ID

XP_016511922.1
PEP Infomation

PREDICTED: glucan endo-1,3-beta-glucosidase-like [Nicotiana tabacum]
Sequence

MPDKRPSMLLVLIFFVAPLFFPAVNSIGVNYGTLGNNLPPPAQVAQFLKDKTVIDRIKIF
DINPDILRAFANTGISVTVTVPNGEIPNLLDISYARRYIDANIKPFYPQTKIDVILVGNE
VLHWDGPDIQMKLVPAMKTFYQALGQSGLKDIKVSSPHSLGILLRSNPPSAARFRPGWDV
GILAPMLQFLRETKGPFMXKGPFMVNPYPYFGYNPKQEDFLLFRKNKGVYDRFSKKWYTN
SFDMLLDAVYMSMVRLKYPDVEIVAAETGWPSQGESFEPQCTVENAASYNGGLLRKYNSG
TGTPLMPHRKIETYIFGLFNENTKPGSTAERNFGLFRPDFTPVYNIGVLKGEQAQPTPAL
PAPRNGSGNNGQPTSPVRPAESKKFCMPKAEATDAQLQSNINYVCSQGVDCTPIQAGGPC
FNPNTIRSHAAFAMNSYYQREGRNQFNCDFAGTGVVASADPSYGTCKFQS

Transcript Sequence

Gene sequence data has not been registered.